[INFO] cloning repository https://github.com/38/pyd4
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ae36c59429e1ac7bc38bf4a4e6f3f2942bf58526
[INFO] checking 38/pyd4 against master#9610dfe5a9a731ced1ea4923ecbd0c57fe367898 for beta-170-4
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain 9610dfe5a9a731ced1ea4923ecbd0c57fe367898
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/38/pyd4
[INFO] finished tweaking git repo https://github.com/38/pyd4
[INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating git repository `https://github.com/38/d4-format.git`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-derive-backend v0.12.4
[INFO] [stderr]   Downloaded pyo3cls v0.12.4
[INFO] [stderr]   Downloaded bindgen v0.55.1
[INFO] [stderr]   Downloaded pyo3 v0.12.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] ec027d69a433f5d02fa57bf6c6988f88de91eb9715e13cbb5cd97296e6045664
[INFO] running `Command { std: "docker" "start" "-a" "ec027d69a433f5d02fa57bf6c6988f88de91eb9715e13cbb5cd97296e6045664", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ec027d69a433f5d02fa57bf6c6988f88de91eb9715e13cbb5cd97296e6045664", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ec027d69a433f5d02fa57bf6c6988f88de91eb9715e13cbb5cd97296e6045664", kill_on_drop: false }`
[INFO] [stdout] ec027d69a433f5d02fa57bf6c6988f88de91eb9715e13cbb5cd97296e6045664
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] adbed8aff2c1b2765b1abf38bee7ced71a2e4a40cafeb6471f19b6855c407f25
[INFO] running `Command { std: "docker" "start" "-a" "adbed8aff2c1b2765b1abf38bee7ced71a2e4a40cafeb6471f19b6855c407f25", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.99
[INFO] [stderr]    Compiling proc-macro2 v1.0.28
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.74
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling bindgen v0.55.1
[INFO] [stderr]    Compiling libloading v0.7.0
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling serde v1.0.127
[INFO] [stderr]    Compiling pkg-config v0.3.19
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]     Checking instant v0.1.10
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling serde_derive v1.0.127
[INFO] [stderr]    Compiling inventory v0.1.10
[INFO] [stderr]    Compiling clang-sys v1.2.0
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]     Checking smallvec v1.6.1
[INFO] [stderr]    Compiling serde_json v1.0.66
[INFO] [stderr]     Checking lock_api v0.4.4
[INFO] [stderr]     Checking itoa v0.4.7
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling pyo3 v0.12.4
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]     Checking getrandom v0.1.16
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]     Checking flate2 v1.0.20
[INFO] [stderr]     Checking memmap v0.7.0
[INFO] [stderr]     Checking parking_lot_core v0.8.3
[INFO] [stderr]     Checking rayon-core v1.9.1
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking parking_lot v0.11.1
[INFO] [stderr]     Checking rand_chacha v0.2.2
[INFO] [stderr]     Checking rand v0.7.3
[INFO] [stderr]     Checking rayon v1.5.1
[INFO] [stderr]     Checking paste v0.1.18
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]     Checking d4-framefile v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)
[INFO] [stderr]    Compiling pyo3-derive-backend v0.12.4
[INFO] [stderr]    Compiling ghost v0.1.2
[INFO] [stderr]    Compiling inventory-impl v0.1.10
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling ctor v0.1.20
[INFO] [stderr]    Compiling pyo3cls v0.12.4
[INFO] [stderr]     Checking indoc v0.3.6
[INFO] [stderr]    Compiling d4-hts v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)
[INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-425bb5e687624f34/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr]   + pushd /opt/rustwide/target/debug/build/d4-hts-97b01adc77093fda/out
[INFO] [stderr]   + HTSLIB_VERSION=1.11
[INFO] [stderr]   + rm -rf /opt/rustwide/target/debug/build/d4-hts-97b01adc77093fda/out/htslib
[INFO] [stderr]   + git clone -b 1.11 https://github.com/samtools/htslib.git
[INFO] [stderr]   Cloning into 'htslib'...
[INFO] [stderr]   fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com
[INFO] [stderr]   thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n                                        &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/git/checkouts/d4-format-79e980b083c9a312/fe86a8f/d4-hts/build.rs:34:5
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5631da35d4b1 - std::backtrace_rs::backtrace::libunwind::trace::h036e87df56fc4b9d
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5
[INFO] [stderr]      1:     0x5631da35d4b1 - std::backtrace_rs::backtrace::trace_unsynchronized::hd61eb2dbd6ae476a
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x5631da35d4b1 - std::sys_common::backtrace::_print_fmt::h00c50d0875db23c9
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/sys_common/backtrace.rs:65:5
[INFO] [stderr]      3:     0x5631da35d4b1 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h63195ab2dde77ccc
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stderr]      4:     0x5631da3846ef - core::fmt::rt::Argument::fmt::h83f4110348c688f4
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/core/src/fmt/rt.rs:138:9
[INFO] [stderr]      5:     0x5631da3846ef - core::fmt::write::h509367dd365f983a
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/core/src/fmt/mod.rs:1094:21
[INFO] [stderr]      6:     0x5631da35a921 - std::io::Write::write_fmt::h8e60bfebdaabfee5
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/io/mod.rs:1713:15
[INFO] [stderr]      7:     0x5631da35d2c5 - std::sys_common::backtrace::_print::h96e550016098cde6
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stderr]      8:     0x5631da35d2c5 - std::sys_common::backtrace::print::h7a049611b153a02e
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stderr]      9:     0x5631da35ed07 - std::panicking::default_hook::{{closure}}::h1b023d46676794c4
[INFO] [stderr]     10:     0x5631da35eaf4 - std::panicking::default_hook::hea2961dabcf68e83
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:288:9
[INFO] [stderr]     11:     0x5631da35f1bc - std::panicking::rust_panic_with_hook::h4285c91a8168b001
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:705:13
[INFO] [stderr]     12:     0x5631da35f071 - std::panicking::begin_panic_handler::{{closure}}::h6ebd0d46f0c6b010
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:595:13
[INFO] [stderr]     13:     0x5631da35d8e6 - std::sys_common::backtrace::__rust_end_short_backtrace::h92042d128576b63a
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/sys_common/backtrace.rs:151:18
[INFO] [stderr]     14:     0x5631da35ee02 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:593:5
[INFO] [stderr]     15:     0x5631d9f4f4a3 - core::panicking::panic_fmt::h65404fc8061ee73a
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/core/src/panicking.rs:67:14
[INFO] [stderr]     16:     0x5631d9f4f533 - core::panicking::panic::h7d9faa13e696cead
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/core/src/panicking.rs:117:5
[INFO] [stderr]     17:     0x5631d9f51e93 - build_script_build::build_own_htslib::ha7b37b2953f493b8
[INFO] [stderr]     18:     0x5631d9f522f1 - build_script_build::main::h97d641ab3d36326d
[INFO] [stderr]     19:     0x5631d9f510a3 - core::ops::function::FnOnce::call_once::h629bf2095e2a0702
[INFO] [stderr]     20:     0x5631d9f51076 - std::sys_common::backtrace::__rust_begin_short_backtrace::h868b7ab5adfb7a3f
[INFO] [stderr]     21:     0x5631d9f51389 - std::rt::lang_start::{{closure}}::h46d489273d98f6bf
[INFO] [stderr]     22:     0x5631da3569e5 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h49ef85a8a8d45198
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/core/src/ops/function.rs:284:13
[INFO] [stderr]     23:     0x5631da3569e5 - std::panicking::try::do_call::ha1def14af693a135
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:500:40
[INFO] [stderr]     24:     0x5631da3569e5 - std::panicking::try::haa3dc2a1139932e2
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:464:19
[INFO] [stderr]     25:     0x5631da3569e5 - std::panic::catch_unwind::h9d9cbebaf9f15c67
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panic.rs:142:14
[INFO] [stderr]     26:     0x5631da3569e5 - std::rt::lang_start_internal::{{closure}}::hf660a772669a69cc
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/rt.rs:148:48
[INFO] [stderr]     27:     0x5631da3569e5 - std::panicking::try::do_call::hb1c34715bb9b1c46
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:500:40
[INFO] [stderr]     28:     0x5631da3569e5 - std::panicking::try::h499866fd990da8f1
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panicking.rs:464:19
[INFO] [stderr]     29:     0x5631da3569e5 - std::panic::catch_unwind::hac1ffec55b72e7bc
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/panic.rs:142:14
[INFO] [stderr]     30:     0x5631da3569e5 - std::rt::lang_start_internal::h0fecf91cd579e7b6
[INFO] [stderr]                                  at /rustc/9610dfe5a9a731ced1ea4923ecbd0c57fe367898/library/std/src/rt.rs:148:20
[INFO] [stderr]     31:     0x5631d9f51367 - std::rt::lang_start::h6964127e9ad5db13
[INFO] [stderr]     32:     0x5631d9f52925 - main
[INFO] [stderr]     33:     0x7f84503b9d90 - <unknown>
[INFO] [stderr]     34:     0x7f84503b9e40 - __libc_start_main
[INFO] [stderr]     35:     0x5631d9f4fd35 - _start
[INFO] [stderr]     36:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "adbed8aff2c1b2765b1abf38bee7ced71a2e4a40cafeb6471f19b6855c407f25", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "adbed8aff2c1b2765b1abf38bee7ced71a2e4a40cafeb6471f19b6855c407f25", kill_on_drop: false }`
[INFO] [stdout] adbed8aff2c1b2765b1abf38bee7ced71a2e4a40cafeb6471f19b6855c407f25
